Poster Xpress presentation

Thematic areas 

Database and Software Development Education and Outreach
Genes and Genomics Phylogeny and Evolution
Proteins and Proteomics RNA and Transcriptomics
Systems Biology and Networks

Database and Software Development

294413 A database of viral taxon-specific profile HMMs for the detection and classification of viral sequences
  Liliane Santana Oliveira Kashiwabara, Wendel Hime Lima Castro, Arthur Gruber
   
297927 PLANT CO-EXPRESSION ANNOTATION RESOURCE 2.0: A WEB TOOL FOR THE ASSOCIATION OF PROTEINS OF UNKNOWN FUNCTION TO ABIOTIC STRESSES IN PLANTS
  Marcos José Andrade Viana, Adhemar Zerlotini Neto, Maurício de Alvarenga Mudadu
   
298211 ToxAnalyzer: A tool for Comparative Toxicogenomics Database (CTD)™ data analysis and visualization
  Daniel Ribeiro Rodrigues, Diego César Batista Mariano, Lucianna Helene Silva dos Santos, Carlos Alberto Tagliati
   
303169 A machine-learning scoring function for protein-ligand molecular docking
  Oscar Emilio Arrúa Arce, Andrej Aderhold, Adriano Velasque Werhli, Karina dos Santos Machado
   
304988 Machine Learning models applied to the subtypes classification of Acute Myeloid Leukemia and Myelodysplastic Syndrome
  Fábio Malta de Sá Patroni, Marcelo Mendes Brandão
   

Education and Outreach

303431 LEAGUE OF BRAZILIAN BIOINFORMATICS: CHALLENGES TO PROMOTE SCIENTIFIC TRAINING
  Lucas Miguel de Carvalho, Neli Jose da Fonseca Junior, Raquel Riyuzo de Almeida Franco, Elvira C Alves Horacio, Maira Rodrigues de Camargo Neves, Nilson Coimbra, Mayla Abrahim Costa, Flavia Figueira Aburjaile, Sheila Tiemi Nagamatsu
   

Genes and Genomics

296059 A survey of bacterial and archaeal genomes reveals novel casposon elements and hosts
  Táriky Meirelles Rocha, Liliane Santana Oliveira Kashiwabara, Bas Dutilh, Arthur Gruber
   
296609 GenTreat: Computational pipeline to perform automated hybrid assembly
  Victória Cardoso dos Santos, Gislenne da Silva Moia, Mônica Silva de Oliveira, Pablo Henrique Caracciolo Gomes de Sá, Jorianne Thyeska Castro Alves, Adonney Allan de Oliveira Veras
   
297651 COMPUTATIONAL PIPELINE FOR THE IDENTIFICATION OF HLA SOMATIC MUTATIONS: CAN SNV/INDELS EXPLAIN IMMUNOTHERAPY FAILURE IN NON-MUSCLE INVASIVE BLADDER CANCER?
  Ramon Torreglosa do Carmo, Giulia W. Frigugliett, Diogo A Bastos, Vitor Rezende da Costa Aguiar, Fabiana Bettoni, Diogo Meyer, Erick da Cruz Castelli, Anamaria A. Camargo, Cibele Masotti
   
297674 Complexity Analysis of Algorithms: A case study about Bioinformatics Tools
  Gislenne da Silva Moia, Luan Ribeiro Siqueira, Victória Cardoso dos Santos, Mônica Silva de Oliveira, Adonney Allan de Oliveira Veras
   
297709 DNA methylation and functional annotation of CpG-SNPs in the TIMP3 locus associated with TIMP3 levels and preeclampsia
  Juliana de Oliveira Cruz, Daniela Alves Pereira, Natalia Duarte Linhares, Marcelo Rizzatti Luizon
   
297728 Resistome profile of Acinetobacter baumannii
  Diego Lucas Neres Rodrigues, Francielly Rodrigues da Costa, Roselane Gonçalves dos Santos, Flavia Figueira Aburjaile, Vasco A de C Azevedo
   
297956 Analysis of UVA induced mutagenesis in translesion synthesis-deficient human cells
  Camila Corradi, Nathalia Quintero Ruiz, Natália Cestari Moreno, Tiago Antonio de Souza, Carlos Frederico Martins Menck
   
297987 Mesoscopic evaluation of DNA mismatches in PCR primers for SARS-CoV-2 detection
  Pâmella Miranda de Moura, Gerald Weber
   
298052 A PUTATIVE ENHANCER REGION ACTIVATED BY METFORMIN OVERLAPS WITH SNPS ASSOCIATED WITH VISTAFIN/NAMPT LEVELS
  Daniela Alves Pereira, Lídia Lana Ferreira Coura, Marcelo Rizzatti Luizon
   
298089 FUNCTIONAL ANNOTATION OF INTRONIC SNPs OF ARG2 GENE ASSOCIATED WITH FETAL HEMOGLOBIN LEVELS IN PATIENTS WITH SICKLE CELL ANEMIA TREATED WITH HYDROXYUREA
  Bárbara Lisboa Nogueira, Rahyssa Rodrigues Sales, Marcelo Rizzatti Luizon
   
298111 The genomic signature of Fungi at the gene- and pathway-levels
  Aline Soares dos Reis, Alison Menezes, Francisco Pereira Lobo
   
300241 In silico strategies to identify IP3 receptors and their function in activation of the plasma membrane H(+)-ATPase in Saccharomyces cerevisiae cells
  Raquel D. Penido, Sayonara Quaresma Alves Campos, Cleberson Marcelo dos Santos, Rodrigo Bentes Kato, Aureliano Claret da Cunha, ROGELIO LOPES BRANDAO, Izinara Rosse
   
301064 Characterization of bacteriocins in Xanthomonas citri
  Milena Gomes Cabral, Juan Carlos Ariute, Ana Maria Benko-Iseppon, Flavia Figueira Aburjaile
   
301462 TEN COMPLETE MITOCHONDRIAL GENOMES OF GYMNOCHARACINI (STETHAPRIONINAE, CHARACIFORMES)
  Matheus Lewi Cruz Bonaccorsi de Campos, Iuri Batista da Silva, Rubens Pasa, Fabiano Menegidio, Igor Henrique Rodrigues-Oliveira, Dinaíza Abadia Rocha-Reis, John Seymour (Pat) Heslop-Harrison, Trude Schwarzacher, Karine Frehner Kavalco
   
303040 Metagenomic analysis of the enzyme a-Galactosidase in two soil samples
  Jéssica Patricia De Sá Souza, Sthephanye Katherine Ferreira Gomes, Maricy Raquel Lindenbah Bonfá, Rodrigo Matheus Pereira
   
303108 How much primer choice affects the perceived biodiversity? A case study of bat diet according to three COI gene regions.
  Marcele Laux, Enrico Bernard, Renato Renison Moreira Oliveira, Angélico Fortunato Asenjo Flores, Eder Soares Pires, Ronnie Alves, Gisele Nunes Lopes, Guilherme Oliveira
   
303186 Mining of 141,456 high-quality human exomes and genomes reveals the presence of 10,909 putative immunoglobulin heavy chain IGHV variants
  Fábio Martins, Lucas Alves de Melo Pontes, Tiago Mendes, Liza Figueiredo Felicori Vilela
   
304798 Elucidating the multiple genetic lineages using SNP data in livestock
  Luiz Afonso Glatzl Junior, Marcos Vinicius Gualberto Barbosa da Silva, Saulo Moraes Villela
   
305268 Role of functional polymorphisms in the p53 pathway genes and the genetic susceptibility to Congenital ZIKV Syndrome
  Julia do Amaral Gomes, Eduarda Sgarioni, Igor Araujo Vieira, Lucas R Fraga, Patrícia Ashton-Prolla, Ana Cláudia P Terças-Tretell, Marcial Francis Galera, Maria Denise Fernandes Carvalho de Andrade, Lavinia Schuler-Faccini, Fernanda Sales Luiz Vianna
   
305296 Large runs of homozigozity regions in Arapaima gigas (Pirarucu) suggest the existence of genomic regions in single-copy and a sex-related dosage-compensation mechanism.
  Renata Lilian Dantas Cavalcante, José Miguel Ortega, SIDNEY EMANUEL B DOS SANTOS, Jorge Estefano Santana De Souza, Tetsu Sakamoto
   
305812 Unraveling potential probiotic features in the genome of Lactobacillus paragasseri
  Rodrigo Dias de Oliveira Carvalho, Flavia Figueira Aburjaile, Rodrigo Profeta Silveira Santos, Marcus Vinicius Canário Viana, Vasco Ariston de Carvalho Azevedo
   
307886 Predicting melting temperatures and deriving hydrogen bonds using the Peyrard-Bishop model for LNA+DNA:DNA sequences
  Izabela Ferreira, Gerald Weber
   

Phylogeny and Evolution

301463 AMONG GENERA: A PHYLOGENETIC INFERENCE WITH MITOGENOMES OF NINE SPECIES OF STETHAPRIONINAE (CHARACIDAE, CHARACIFORMES)
  Iuri Batista da Silva, Matheus Lewi Cruz Bonaccorsi de Campos, Rubens Pasa, Fabiano Menegidio, Igor Henrique Rodrigues-Oliveira, Dinaíza Abadia Rocha-Reis, John Seymour (Pat) Heslop-Harrison, Trude Schwarzacher, Karine Frehner Kavalco
   
303178 Effects of Alignment Characteristics on Distance-based Tree Reconstruction
  Guilherme Taborda Ribas, Roberto Tadeu Raittz, ALEXANDRE GORI DE CASTILHO, Jeroniza Nunes Marchaukoski, Dieval Guizelini
   
307927 First-ever described Virome of the Amazonian Lake Bolonha: contributions to the understanding of water-related public health concerns
  Bruna Verônica Azevedo Gois, Kenny da Costa Pinheiro, Wylerson Guimarães Nogueira, Andressa de Oliveira Aragão, Ana Lidia Queiroz Cavalcante, adriana ribeiro carneiro folador, Rommel Thiago Jucá Ramos
   
307952 Assembly, annotation and gene editing of the genome of the PH8 strain of Leishmania amazonensis with focus on multigene families encoding virulence factors
  Wanessa Moreira Goes, Carlos Rodolpho Ferreira Brasil, João Luís Reis Cunha, Anderson Coqueiro-dos-Santos, Viviane Grazielle da Silva, Daniella Bartholomeu, Ana P. S. M. Fernandes, Santuza Maria Ribeiro Teixeira
   

Proteins and Proteomics

296745 The extracellular vesicles produced by the probiotic Propionibacterium freudenreichii in different conditions share a core proteome that includes immunomodulatory proteins
  Vinícius de Rezende Rodovalho, Brenda Silva Rosa da Luz, Fillipe Luiz Rosa do Carmo, Gwenaël Jan, Yves Le Loir, Vasco A de C Azevedo, Eric Guedon
   
301377 ANTIGENIC VARIABILITY OF DENGUE VIRUS NON-STRUCTURAL PROTEIN 1 AND ITS IMPACT ON THE DEVELOPMENT OF DIAGNOSTIC MODELS
  UBIRATAN DA SILVA BATISTA, ANA CLARA GOMES DE SOUZA, Túlio César Rodrigues Leite, RICARDO LEMES GONÇALVES, Breno De Mello Silva
   
302913 Classification of amino acid residue pairs using GMM and EM Algorithm
  Higor Coimbra Amorim
   
302914 IMMUNOINFORMATICS APPROACHS TO DESIGN A CHIMERIC MULTI-EPITOPE VACCINE AGAINST MYCOPLASMA PNEUMONIAE
  Thaís Cristina Vilela Rodrigues, Arun Kumar Jaiswal, Helioswilton Sales de Campos, Marta Giovanetti, Rodrigo Bentes Kato, Stephane Fraga de Oliveira Tosta, sandeep tiwari, Vasco A de C Azevedo, Siomar de Castro Soares
   
303067 Which substilisin/kexin like proprotein convertases PCSKs might be or not be implicated in SARS-Cov-2 cell to cell infection?
  Arthur Pereira Fonseca, Lucianna Helene Silva dos Santos, Lucas Bleicher, José Miguel Ortega
   
305422 Unrevealing novel potential therapeutic targets in fungi extracellular vesicle proteins: a comparative study between pathogenic and non-pathogenic fungi species
  Vinicius da Silva Coutinho Parreira, Letícia Graziela Costa Santos, Marcio Rodrigues, Fabio Passetti
   

RNA and Transcriptomics

294641 Metatranscriptomics analysis reveals diverse viral RNA in cutaneous papillomatous lesions and normal tissues of cattle
  Adriana de Oliveira Fernandes, GERLANE DOS SANTOS BARROS, Marcus Vinicius de Aragão Batista
   
297986 Environmental plasticity of Staphylococcus aureus extracellular vesicles RNA content
  Brenda Silva Rosa da Luz, Aurélie Nicolas, Svetlana Chabelskaya, Vinícius de Rezende Rodovalho, Yves Le Loir, Vasco A de C Azevedo, Brice Felden, Eric Guedon
   
298059 Analysis of expression of xylanases encoded in the genome of rust coffee fungus during different stages of infection
  Júlia Santos Pereira, Túlio Morgan, Rafaela Zandonade Ventorim, Renato Lima Senra, Isabel Samila Lima Castro, Eveline Teixeira Caixeta, Tiago Mendes
   
298120 microRNAs, target-genes and pathways related to Gestational Diabetes Mellitus: searching for potential biomarkers
  João Rafael Gonçalves Pereira, Izabela Mamede Costa Andrade da Conceição, Graziele Pimentel Coelho Almeida, Marcelo Rizzatti Luizon
   
298253 Pathway analysis of target-genes for microRNAs related the pathophysiology of Pre-eclampsia
  Graziele Pimentel Coelho Almeida, Izabela Mamede Costa Andrade da Conceição, João Rafael Gonçalves Pereira, Marcelo Rizzatti Luizon
   
300190 miRNA-BASED PROGNOSTIC PREDICTOR FOR OVARIAN TUMORS USING MACHINE LEARNING
  Cristiane Esteves Teixeira, Alexandre Chiavegatto Filho, Mariana Boroni
   
300276 Insights into plant adaptations to occupy a challenging Amazonian habitat
  Mariana Dias, Cecílio Frois Caldeira, Guilherme Oliveira
   
300289 De novo transcriptomes of endangered Amazonian bats and the detection of a rich source of virus information
  Mariana Dias, Santelmo Vasconcelos, Leonardo Trevelin, Renato Renison Moreira Oliveira, Mariane Ribeiro, Guilherme Oliveira
   
300776 Evaluation of lncRNAs as potential prognostic biomarkers in metastatic melanoma using machine learning
  Guilherme Duarte de Moraes, Cristiane Esteves Teixeira, Nicole de Miranda Scherer, Mariana Boroni
   
300869 Modeling alelle-specific expression in complex polyploids
  Fernando Henrique Correr, Agnelo Furtado, Antonio Augusto Franco Garcia, Robert James Henry, Gabriel Rodrigues Alves Margarido
   
302700 Interactive Meta-analysis Framework for Biomarker Identification in Breast Cancer subtypes.
  Nathan de Oliveira Nunes, Ana Claudia Oliveira Carreira, Milton Yutaka Nishiyama Junior
   
303012 Classification of mRNA and ncRNA sequences: a study based on complex networks and filter by exclusivity
  Murilo Montanini Breve, Fabrício Martins Lopes
   
303033 A wide tRNA-derived small RNA annotation in Astatotilapia latifasciata with B chromosome presence or absence.
  Luiz Augusto Bovolenta, Adauto Lima Cardoso, Rafael Takahiro Nakajima, Jordana Inácio Nascimento Oliveira, Bruno Evaristo de Almeida Fantinatti, Rafael Luiz Buogo Coan, Cesar Martins
   
303082 Bioinformatics analysis reveals novel long non-coding RNA candidates in Ewing sarcoma
  Rafael Luiz Buogo Coan, Caroline Brunetto de Farias, André Tesainer Brunetto, Marialva Sinigaglia, Ney Lemke
   
303086 Integrative analyses of single-cell and bulk transcriptomics to study the tumor microenvironment in high-grade serous ovarian cancer
  Giovanna Resk Maklouf, Gabriela Rapozo Guimarães, Palloma Porto Almeida, MARCO ANTONIO MARQUES PRETTI, Mariana Boroni
   
303096 Comparative midgut transcriptome analysis of Helicoverpa armigera feeding on natural conditions
  André Ricardo Oliveira Conson, Natalia Faraj Murad, Karina Lucas da Silva Brandão, Fernando Luis Cônsoli, Celso Omoto, Marcelo Mendes Brandão
   
303133 Metformin regulates cells epigenomic landscape leading to decreased proliferation and inflammation in hepatocytes
  Izabela Mamede Costa Andrade da Conceição, Lucio Rezende Queiroz, Paula Silva Matos, Gloria Regina Franco, Marcelo Rizzatti Luizon
   
303167 Expression Analysis Integration with Inferencing of Gene Regulatory Networks
  Juliana Costa-Silva, David Menotti, Fabrício Martins Lopes
   
303199 De novo transcriptome assembly and functional annotation of cobia (Rachycentron canadum) liver
  David Aciole Barbosa, Bruno Cavalheiro Araújo, Alexandre Wagner Silva Hilsdorf, Luiz R. Nunes, Renata G. Moreira, Fabiano Bezerra Menegidio
   
303228 Molecular characterization of Saccharomyces cerevisiae industrial strain PE-2 under high ethanol conditions in industrial fermenters
  THIAGO SENA SIMOES, Marcelo Mendes Brandão, Flavia Vischi Winck
   
304948 CHANGES INTHE EXPRESSION PROFILE OF TRANSCRIPT ISOFORMS IN MICE HEARTS CAUSED BY TRYPANOSOMA CRUZI INFECTION
  Nayara Evelin de Toledo, Raphael Tavares da Silva, Tiago Bruno Rezende de Castro, Stellamaris Soares, Carlos Renato, Andréa Mara Macedo, Gloria Regina Franco
   
305282 Yclon: Ultrafast clustering of B cell clones from high-throughput immunoglobulin repertoire sequencing data
  JOÃO HENRIQUE DINIZ BRANDÃO GERVÁSIO, Alice Ferreira de Souza, Liza Figueiredo Felicori Vilela
   
305366 Where the pro-proteases PCSKs that may cleave the SARS-Cov-2 spike for improving cell to cell infection are highly differentially expressed in the human body?
  Lissur Azevedo Orsine, Arthur Pereira Fonseca, Glaura da Conceição Franco, José Miguel Ortega
   
305446 Improvement of Angiostrongylus costaricensis genome annotation using RNA-Seq data
  ESDRAS MATHEUS GOMES DA SILVA, Karina Mastropasqua Rebello, Makedonka Mitreva, James McKerrow, Ana Gisele da Costa Neves Ferreira, Fabio Passetti
   
305587 A novel mitovirus from the sand fly Lutzomyia longipalpis shows sRNA profiles consistent with siRNA pathway activation
  Paula Luize Camargos Fonseca, Flavia Viana Ferreira, Felipe Ferreira da Silva, Liliane Santana Oliveira Kashiwabara, João Trindade Marques, Aristóteles Góes-Neto, Eric Roberto Guimarães Rocha Aguiar, Arthur Gruber
   
305749 Autophagy related genes influence global survival in Ewing's sarcoma
  Matheus Dalmolin, Mauricio Gomes, Ricardo M. Ferreira, Caroline Brunetto de Farias, André Tesainer Brunetto, Mariane da Cunha Jaeger, Rafael Roesler, Marialva Sinigaglia, Rita Maria Cunha de Almeida
   

Systems Biology and Networks

297990 Dynamics of the feedback loops required for the phenotypic stabilization in the epithelial-mesenchymal transition
  Daner Acunha Silveira, José Carlos Merino Mombach
   
300303 Study on Tsallis Entropy applied on Network Inference
  Cassio Henrique dos Santos Amador, Fabrício Martins Lopes
   
302883 Network-based identification of subtype-specific candidate genes and associated drugs for new therapies in colorectal cancer
  Cristóvão Antunes de Lanna, Nicole de Miranda Scherer, Luís Felipe Ribeiro Pinto, Mariana Boroni
   
302928 Multi-omics-based identification of SARS-CoV-2 infection biology and candidate drugs against COVID-19
  sandeep tiwari, Debmalya Barh, Marianna E. Ivanova, Vasco A de C Azevedo, Aristóteles Góes-Neto, M. Michael Gromiha, Preetam Ghosh
   
303479 Comparative analysis of genetic networks of Anticarsia gemmatalis Hübner, 1818 (Lepidoptera: Erebidae) obtained from transcriptomes of strains resistant and susceptible to the protein Cry of Bacillus thuringiensis
  Freddy Eddinson Ninaja Zegarra, Rogério Fernandes de Souza, Fabrício Martins Lopes, Laurival Antônio Vilas Boas
   
305292 txGeneNetwork: transcript-level functional analysis using network biology
  Izabela Mamede Costa Andrade da Conceição, Lucio Rezende Queiroz, Gloria Regina Franco