Poster Session A - Sept 14 |
GENOMICS |
GE-01 |
Detecting evidences of inter-chromosomal
trans-spliced genes using
a bioinformatic approach
|
Roberto Hirochi Herai |
GE-03 |
Protein Kinases of the parasite Schistosoma
mansoni
|
Luiza Andrade |
GE-05 |
Computational
analysis of the Schistosoma
mansoni genome for
the identification of vaccine
candidates |
Rômulo Moraes |
GE-07 |
Evolutionary history of exon-shuffling
|
Gustavo França |
GE-09 |
A study on the distribution of phylogenetically
conserved blocks within
clusters of mammalian homeobox
genes
|
Nikola Stojanovic |
GE-11 |
Null models in log-odds
of profile-based models |
Ariane Machado-Lima |
GE-13 |
Two Intracellular 3-hydroxybutyrate-Oligomer
Hydrolases and Possibly
four Poly(3-hydroxybutyrate)
depolymerases (PhaZd) Genes
are involved in the Mobilization
System in Burkholderia sacchari
|
Nuri Andrea Merchan Castellanos |
GE-15 |
Prediction non-coding RNA in comparative
analyze approach in Apis
mellifera and Nasonia
vitripennis
|
Alexandre Rossi Paschoal |
GE-17 |
Identification of Putative Sugarcane
Promoter Homologues in Sorghum
|
Flávio Vicente |
GE-19 |
Immunogenic regions on the N protein
from hantavirus genus: implications
in vaccine development
|
Maurício Rigo |
GE-21 |
Computational prediction and characterization
of the bir multigene family
of Plasmodium berghei
|
Luciana Márcia Oliveira |
GE-23 |
Comparative genomic analysis of Vibrio
cholerae biotypes El
Tor N16961 and Classical
O395 and identification
of putative horizontally
transferred genes from different
genera to these strains
|
Fábio Mota |
GE-25 |
Comparative Genomic Analyses in Sequenced
Shewanella Genus
|
Amanda Lys Silva |
GE-27 |
Using Scientific Workflows to detect
distant homologies on protozoan
metabolic pathways
|
Rafael Cuadrat |
GE-29 |
Actin-Interacting and Flagellar Proteins
in Leishmania spp.:
Bioinformatics Predictions
to Functional Assignments
in Phagosome Formation
|
Angela Pinheiro |
GE-31 |
GIAnT: Genomic Island Analyser Tool
|
Luiz Rangel |
GE-33 |
The chitin synthases of basidiomycotan
fungi
|
Marcel Diniz |
GE-35 |
Understanding BLAST scores with different
PSSM matrices
|
Izabella Pena |
STRUCTURE |
ST-01 |
QM theoretical study by
MC-RSO of the homologous
toxins sequences of Crotalus
sp., peptide C and myotoxin
A |
Antônio Fernandes |
ST-03 |
Protein family Structural
Classification Based on
Intra-chain Contacts |
Raquel Melo-Minardi |
ST-05 |
Orangines: understanding
proteins through sphere
packing simulations |
Douglas Pires |
ST-07 |
Evaluation of point mutation
in genes related to ketogluconic
acid production by Gluconacetobacter
diazotrophicus |
Paula Kuser-Falcão |
ST-09 |
Tipification of Avian Infectious
Bronchitis Virus (AIBV)
Isolates By S1 Segment Sequencing
and Protein Modelling |
Josiane Abreu |
ST-11 |
Prediction of Binding Hot
Spot Residues by using structural
and evolutionary parameters |
Roberto Higa |
ST-13 |
Evaluation of ligand-binding
affinity using polynomial
empirical scoring functions |
Raquel Dias |
ST-15 |
Analyses of nucleases modeling
structures and the heterologous
expression of the Serratia
marcenses nuclease in
Saccharomyces cerevisiae |
Ana Raquel Monteiro |
ST-17 |
In silico
evaluation of structural
relations between 2S albumins
and antimicrobial activity
|
Rodrigo Honorato |
ST-19 |
Comparative modeling of
proteins involved in Vibrio
cholerae Pi-starvation
response |
Daniel Leite |
ST-21 |
Algorithm to Predict Alpha-helices
in Secondary Structure of
Protein's Families |
Alexandre Melo |
ST-23 |
Constrained Docking of scorpion
ß-toxin Ts3 with a
model of domain II of Nav1.2
channel |
Rodrigo Véras |
ST-25 |
Analysis of Protein-Protein
contacts in Subtilase complexes
using NEQUIM Contact System
(NCS) |
Valdete Almeida |
ST-27 |
Molecular dynamics studies
of enoyl reductase from
Plasmodium falciparum
3d7 |
Fernando Zanchi |
ST-29 |
Studies of nitrogenase's
conformational protection
mechanism in Azotobacter
vinelandii and Gluconacetobacter
diazotrophicus using
molecular modeling techniques |
Mainá Bitar |
ST-31 |
Comparative Modeling of
cistein protease of Theobroma
cacoa |
Deise Andrade |
ST-33 |
Computational Prediction
and Biologics Characterizations
of Neutralizing Epitope
of Mutalysin II, an endopeptidase
from bushmaster Lachesis
muta muta snake venom |
Melina Moraes |
ST-35 |
Utilization from Biological
and Physico-Chemical Parameters
Using Bioinformatic Tool
(STING) to the Developing
from Stables Standards of
Hemoglobins to Be Used in
the Haemoglobinopathies
Diagnosis |
Ricardo Andrez |
ST-37 |
Application of Virtual Screening
for Discovery of New Inhibitors
of Human Purine Nucleoside
Phosphorylase |
Ana Luiza Vivan |
ST-39 |
Determination in silico
of the Hsp65 protein tertiary
structure and the its mRNA
secondary structure to improved
Hsp65DNA vaccine |
Renata Rossetti |
FUNCTIONAL
GENOMICS |
FG-01 |
Identification and characterisation
of disordered proteins in
Schsitossoma mansoni |
Raul Torrieri |
FG-03 |
Computational identification
and characterization of
elements associated with
structural order and disorder
in Leishmania braziliensis
predicted proteome |
Patrícia Ruy |
FG-05 |
A new approach to cluster
genes with similar patterns
expression in time-course
microarray experiments |
Fabiano Belém |
FG-07 |
The influence of SNPs in
alternative polyadenylation |
Suzana Ezquina |
FG-09 |
D-MaPs - DNA-Microarray
Projects |
Taís Herig |
FG-11 |
Expression profile of genes
associated to innate immunity
in sugarcane during the
interaction with Gluconacetobacter
diazotrophicus |
Leandro Mattos |
FG-13 |
Transcription Factor Affinity
Analysis on Lymphoid Development |
Ivan Costa |
SYSTEMS
BIOLOGY |
SY-01 |
A Comprehensive Search of
Human Genes Involved in
Apoptosis |
Marialva Sinigaglia |
SY-03 |
Considerations on Using
CoD for Inference of Gene
Regulation Networks |
Carlos Higa |
SY-05 |
A Complex Network Approach
can reveal phylogenetic
relationships of extant
organisms |
Aristóteles Góes-Neto |
SY-07 |
Deterministic and stochastic
simulation of the trp operon
of Escherichia coli |
Itamar de Oliveira |
SY-09 |
A log-likelihood score to
infer condition-specific
subnetworks from small samples
of gene expression data |
Monica Campiteli |
DATABASES |
DB-01 |
HTRIdb: an open-access database
for experimentally verified
human transcriptional regulation
interactions |
Marcio Luis Acencio |
DB-03 |
Virtual Integration of Biological
Databases Through Web Services |
Sabrina Silveira |
DB-05 |
DIVERGENOMA Database: a
bioinformatics tool for
population genetics and
genetic epidemiology studies |
Wagner Magalhães |
DB-09 |
An automated clustering
method to classify microarray
date. |
Milton Faria Jr. |
DB-11 |
The Genome Comparison Project
and the Protein World Database |
Thomas Dan Otto |
DB-13 |
A straightforward multiallelic
significance test for the
Hardy-Weinberg equilibrium
law |
Marcelo Lauretto |
DB-15 |
Clustering samples of gene
expression data by means
of logical expressions evolved
by genetic programming |
Ismael Santana |
DB-16 |
UniRef Enrichment of the
Kegg Orthology databases
- a solution for the database
completeness |
Gabriel Fernandes |
DB-17 |
polymorp.pl: A tool to aid
in the identification of
potential polymorphisms
in cDNA sequences |
Wagner Arbex |
|
Poster
Session B - Sept 15 |
GENOMICS |
GE-02 |
Identification of noncoding
RNAs in neuropsychiatric
disorders and brain aging |
Ariane Machado-Lima |
GE-04 |
Porcine Circovirus 2 Isolates:
a phylogenetic approach |
Pedro Marcus Pereira Vidigal |
GE-06 |
Sequence and structural
analysis of the 5' noncoding
region of hepatitis C virus
in patients with chronic
infection |
Fávio Araújo |
GE-08 |
An algorithm to identify
the evolutionary convergence
of amino acid residues between
two homologous sequences |
Leandro Freitas |
GE-10 |
Issues in imputation of
genotypes in genome-wide
association studies |
Márcio Augusto Afonso
de Almeida |
GE-12 |
Analysis of the Simple Sequence
Repeats in the Expressed
Sequence Tags of the
Trypanosoma vivax |
Silvana Sant'Anna de Souza |
GE-14 |
Paupfriendly friendly application
integrated for phylogenetic
analysis |
Murilo Maciel |
GE-16 |
Functional Diversity of
Fatty Acid Oxidation Proteins
in Gammaproteobacteria |
Laila Nahum |
GE-18 |
Design of degenerate primers
for the identification of
microsatellites in anatto
(Bixa orellana l.) |
Juliana Ribeiro |
GE-20 |
WISARD (Web Interface for
SAGE Analysis and Reports) |
Gustavo Pires |
GE-22 |
On the effect of homopolymer-related
pyrosequencing errors on
gene finding |
Gustavo Costa |
GE-24 |
Somatic mutations in splicing
regulators elements and
its association with alternative
splicing |
Júlia da Cunha |
GE-26 |
Establishment of cross-species
hybridization of human and
mouse transcriptomes on
a platform of cDNA microarray |
Mariana Maschietto |
GE-28 |
Quantitative analysis of
genomic islands in Bacteria |
Patrícia Rocha |
GE-30 |
Identification of possible
eukaryotic initiation factors
of trypanosomatids using
bioninformatics tools |
Eduardo Nunes |
GE-32 |
Use of SNP database to develop
rules for designing a synthetic
p53 coding sequence that
resists to mutation |
Luiza Quadros |
GE-34 |
Metagenomic data survey
using PSSM and MetaGene
algorithm |
Rafael Guedes |
GE-36 |
Efficient recovery of synthetic
orthologs and paralogs with
seed linkage software |
Lucas Santana-Santos |
STRUCTURE |
ST-02 |
Using Linear Algebra for
Protein Structural Comparison
and Classification |
Janaína Gomide |
ST-04 |
Search for Structural Patterns
in RNAs Using Graphs |
Ariane Machado-Lima |
ST-06 |
Evaluation of AlkB protein-substrate
interactions for selection
of n-alkane through 3-D
homology modelling |
Bruno Gomes de Sousa |
ST-08 |
Insight from a 3-D model
of Dsv enzyme complex for
sulfite-binding pockets
competition |
Ciáceres Carvalho |
ST-10 |
NEQUIM Contact System -
Protein-Ligand and Protein-Protein
Contact Fingerprint Generation
and Comparison |
Andrelly Martins José |
ST-12 |
Molecular Dynamics Simulation
of protein Rubredoxin, potential
thermostable |
Thaís Rego |
ST-14 |
Database of High Quality
Ligand-Protein Datasets
for Validation of Docking/Scoring
Studies |
Henrique Elias |
ST-16 |
Simulating the Population
Dynamics of Epithelial Cells
in vitro |
Beatriz Stransky |
ST-18 |
Molecular Dynamics Simulations
of Calmodulin: A Comparative
Study of Reaction Field
and Particle-Mesh Ewald
Eletrostatic Treatments |
Priscila Capriles |
ST-20 |
Classification oracle based
on protein secondary structure
using Singular Value Decomposition |
Oto Coelho Junior |
ST-22 |
A relational database of
structurally variant drug
targets |
Sérgio Amorim de
Alencar |
ST-24 |
Identification of phylogenetic
relationship between GDPD
and SMaseD proteins based
on active site amino acid
physical chemical properties. |
Izabella Pena |
ST-26 |
Predicting the position
of hydrogen atoms in proteins
through the pattern recognition
of hydrogen bonds |
Adauto Mancini |
ST-28 |
Computational analysis suggests
that virulence of Chromobacterium
violaceum might be linked
to biofilm formation and
poly-NAG biosynthesis. |
Sidnei Becker |
ST-30 |
Co-evolution of residues
in the hexokinase family
as measured by statistical
coupling analysis |
Lucas Bleicher |
ST-32 |
Identification of Biological
and Physico-Chemical Parameters
for Bioinformatic tool of
Reprolysin Subfamily of
Zinc Metalloproteinases |
Ricardo Andrez |
ST-34 |
The Table of Interface Forming
Residues as the Specificity
Indicator for Serine Proteases
Bound to Different Inhibitors
Indicator for Serine Proteases
Bound to Different Inhibitors |
Cristina Ribeiro |
ST-36 |
Comparative study by the
MC simulation for the structure
of crotamine homologous
sequence structure of the
Crotalus durissus |
Fabiana Almeida |
ST-38 |
3D Structure of Chitinase
of M. perniciosa by Comparative
Modeling |
Rafaela Galante |
ST-40 |
Study of thyroid hormone
receptor and its mutations |
Paulo Cesar Telles de Souza |
ST-42
|
Mapping Epitopes of Protein
Sequences Using Mimotopes |
José
Geraldo Pereira |
FUNCTIONAL
GENOMICS |
FG-02 |
Identification of breast
cancer alternatively spliced
transcripts through alternative
splicing enriched cDNA libraries |
Elisa Ferreira |
FG-04 |
Use of MESs clustering to
compare tissues by gene
expression |
Saulo Pinto |
FG-06 |
In silico prospection for
new targets in human angiogenesis:
searching VEGF and angiostatin
homologues |
Aline Martins |
FG-08 |
Clustering samples of gene
expression data by means
of logical expressions evolved
by genetic programming |
Ismael Santana |
FG-10 |
High throughput analysis
of Trypanosoma cruzi
transcriptome: mRNA structure
and degradation profile
obtained by microarrays
and pyrosequencing |
Christian Probst |
FG-12 |
Significance tests for the
differential analysis of
any digital gene expression
profiles |
Leonardo Varuzza |
FG-14 |
A graph-theory based computer
aplication which combines
transcription factor binding
sites with putative promoter
regions in yeasts |
Otávio Brustolini |
SYSTEMS
BIOLOGY |
SY-02 |
A three-dimensional multi-agent
based model for the development
of chronic chagasic cardiomyopathy |
Viviane Galvão |
SY-04 |
A systemic approach of complex
dynamics of dengue epidemics
through cellular automata
modelling: comparison with
actual epidemics time series
and time-spatial patterns |
Leonardo Santos |
SY-06 |
In silico modeling of biohydrogen
production. |
Itamar de Oliveira |
SY-08 |
Serial Analysis of Gene
Expression on prostate cancer
pathway |
Melinne Noronha |
DATABASES |
DB-02 |
Integration and use of Schistosoma
mansoni genomic data
for the discovery of candidate
therapeutic targets |
Adhemar Zerlotini |
DB-04 |
SIGLa - A Dynamic System
to Integrate Laboratory
Data Based on Workflow Definition |
Herbert Fernandes |
DB-06 |
Computational Simulation
of the Dengue Epidemy at
Rio de Janeiro in 2008 |
Ane Kelly Geraldo |
DB-07 |
Artificial Intelligence
applied in the selection
of medicinal plants of cerrado
with antimicrobial activity |
Saulo Amui |
DB-08 |
A simple algorithm to remove
redundancy from protein
databank. |
Bráulio Couto |
DB-10 |
FUTDB - FUned Toxin Data
Base: a database to store
data for experiments of
protein and toxin purification. |
Ricardo Ribeiro |
DB-12 |
BioXdb: a cross-reference
database |
Flávio Engelke |
DB-14 |
Database of High Quality
Ligand-Protein Datasets
for Validation of Docking/Scoring
Studies |
Henrique Elias |
DB-18 |
Metagenomic data survey
using PSSM and MetaGene
algorithm |
Rafael Guedes |